Abstract:
Many chemical reaction systems are described by mass action kinetics
which is a system of ordinary differential equations given by
polynomials. The structure of these polynomials are given by two
graphs, a directed graph and a bipartite graph. Thus the steady
states are given as the solutions of a system of sparse polynomials
with a lot of structure.
The algebraic techniques of sparse polynomials will be applied. I
will show how the Hermite normal form decouples some special sparse
polynomial systems into independent systems. That means a nice basis
of the lattice is computed. I will show how Groebner bases of special
ideals (toric ideals) can be used to solve the system leading to
special algorithms. The key idea is the intersection of a toric
variety with a convex polyhedral cone in order to find real solutions.
Finally, I will mention some dynamical aspects. A criterion to decide
stability of all solutions will be presented and Hopf points will be
investigated. Again computational algebraic aspects are discussed.
Cheriton School of Computer Science
University of Waterloo
200 University Avenue West
Waterloo, Ontario, Canada N2L 3G1
519 888 4567
| http://www.scg.uwaterloo.ca



